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terminal transferase kit  (New England Biolabs)


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    Structured Review

    New England Biolabs terminal transferase kit
    Terminal Transferase Kit, supplied by New England Biolabs, used in various techniques. Bioz Stars score: 98/100, based on 1301 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/terminal+transferase/Terminal+Transferase/pm42092133-731-16-19
    Average 98 stars, based on 1301 article reviews
    terminal transferase kit - by Bioz Stars, 2026-10
    98/100 stars

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    Related Articles

    Plasmid Preparation:

    Article Title: Assessing leaky expression of Cre-dependent DNA constructs in the mouse genome using sensitive bioluminescent reporters
    Article Snippet: .. The targeting vector was linearized using restriction enzymes, and then the 3′ end of the targeting vector was biotinylated with biotin-16-ddUTP (Roche, Basel, Switzerland) using terminal transferase (NEB Japan, Tokyo, Japan). .. The resulting DNA fragment was purified from the agarose gel, and its biotinylation efficiency was assessed by a depletion experiment using streptavidin magnetic beads (NEB Japan) and found to be close to 100%.

    Article Title: Assessing leaky expression of Cre-dependent DNA constructs in the mouse genome using sensitive bioluminescent reporters.
    Article Snippet: Both crRNA and tracrRNA were purchased from FASMAC, Atsugi, Japan and their sequences of the crRNAs were as follows: R26-T2-crRNA (5′-CGC CCA UCU UCU AGA AAG ACG UUU UAG AGC UAU GCU GUU UUG-3′) and PITCh-gRNA3-crRNA (5′-GCA UCG UAC GCG UAC GUG UUG UUU UAG AGC UAU GCU GUU UUG-3′). .. For the DAT/iCre knockin mice, Cas9 mRNA and single guide RNA (sgRNA) were injected together with the targeting vector into the cytoplasm of two-cell stage embryos of C57BL/6NJcl mice using a modified 2C-HR-CRISPR method.57 The targeting vector was linearized using restriction enzymes, and then the 3′ end of the targeting vector was biotinylated with biotin-16-ddUTP (Roche, Basel, Switzerland) using terminal transferase (NEB Japan, Tokyo, Japan). .. The resulting DNA fragment was purified from the agarose gel, and its biotinylation efficiency was assessed by a depletion experiment using streptavidin magnetic beads (NEB Japan) and found to be close to 100%.

    Incubation:

    Article Title: Direct-to-library methods, systems, and compositions
    Article Snippet: The processing without the beads (DTL w/o beads) was performed as follows: Plasma was incubated with 1.6 units of Proteinase K (Sigma-Aldrich, St. Louis, MO) in 1× Terminal Transferase Reaction buffer (NEB, Ipswich, MA) at 60° C. for 20 minutes and 95° C. for 10 minutes and placed on ice until cool. .. One third of the solution was added to the A tailing reaction containing 0.16 mM dATP (NEB, Ipswich, MA) and 20 units Terminal Transferase (NEB, Ipswich, MA) and incubated at 37° C. for 25 minutes and heat inactivated at 75° C. for 10 minutes. ..

    Article Title: Direct-to-library methods, systems, and compositions
    Article Snippet: .. 40.0 μL of 10× Terminal Transferase Reaction Buffer (NEB, Ipswich, MA), 2.0 μL of 10 mM dATP and 2.0 μL Terminal Transferase (20 u/μL, NEB, Ipswich, MA) was added to prepare the A-tailing reaction which was incubated at 37° C. for 40 min. ..

    Article Title: Increased Availability of Selective Trace Elements Enhanced Anaerobic Benzoate Oxidation in Geotalea daltonii
    Article Snippet: RNA was extracted as previously described, treated with 0.1 M DTT, and incubated at 42 °C to eliminate secondary structure. cDNA was purified by incubation with 1 M NaOH at 65 °C for 20 min and GeneJet PCR Purification kit (Thermo Scientific, Pittsburgh, PA, USA,). .. DNA was tailed by incubation with Terminal Transferase (New England Biolabs, Ipswich, MA, USA). ..

    Article Title: Direct-to-library methods, systems, and compositions
    Article Snippet: .. 2.0 μL of 10 mM dATP, 2.0 μL Terminal Transferase (20 u/μL, NEB, Ipswich, MA) and 6.0 μL Nuclease-free water was added to prepare the A-tailing reaction which was incubated at 37° C. for 40 min. 300.0 μL of Lysis/Binding Buffer (Thermo-Fisher Scientific, Waltham, MA) was added to the reaction. .. The entire volume was then added to 50.0 μL of Dynabeads oligo (dT)25 (SEQ ID NO: 13) (Thermo-Fisher Scientific, Waltham, MA), which had been washed once with Lysis/Binding Buffer (Thermo-Fisher Scientific, Waltham, MA).

    Article Title: Direct-to-library methods, systems, and compositions
    Article Snippet: .. The reaction conditions used were as follows: (i) RNA A-tailing reaction: 50.0 μL of each spiked sample was mixed with a mastermix comprising of 20.0 μL of 10× E. coli Poly(A) polymerase Reaction Buffer (NEB, Ipswich, MA), 6.0 μL of 10 mM ATP and 3.0 μL Poly(A) polymerase (5000 u/μL, NEB, Ipswich, MA) and 121.0 μL Nuclease-free water to prepare the A-tailing reaction which was incubated at 37° C. for 40 min. (ii) DNA A-tailing reaction: 50.0 μL of each spiked sample was mixed with a master mix comprising of 40.0 μL of 10× Terminal Transferase Reaction Buffer (NEB, Ipswich, MA), 2.0 μL of 10% Tween-20 (Thermo-Fisher Scientific, Waltham, MA), 2.0 μL of 10 mM dATP and 2.0 μL Terminal Transferase (20 u/μL, NEB, Ipswich, MA), and 104.0 μL Nuclease-free water to prepare the A-tailing reaction which was incubated at 37° C. for 40 min. (iii) Combined nucleic acid A-tailing reaction: 50.0 μL of each spiked sample was mixed with a master mix comprising of 40.0 μL of 10× Terminal Transferase Reaction Buffer (NEB, Ipswich, MA), 2.0 μL of 10% Tween-20 (Thermo-Fisher Scientific, Waltham, MA), 2.0 μL of 10 mM dATP, 15.0 μL of 10 mM ATP, 2.0 μL Terminal Transferase (20 u/μL, NEB, Ipswich, MA), 1.0 μL Poly(A) polymerase (5000 u/μL, NEB, Ipswich, MA) and 87.0 μL Nuclease-free water to prepare the A-tailing reaction which was incubated at 37° C. for 40 min. ..

    Knock-In:

    Article Title: Assessing leaky expression of Cre-dependent DNA constructs in the mouse genome using sensitive bioluminescent reporters.
    Article Snippet: Both crRNA and tracrRNA were purchased from FASMAC, Atsugi, Japan and their sequences of the crRNAs were as follows: R26-T2-crRNA (5′-CGC CCA UCU UCU AGA AAG ACG UUU UAG AGC UAU GCU GUU UUG-3′) and PITCh-gRNA3-crRNA (5′-GCA UCG UAC GCG UAC GUG UUG UUU UAG AGC UAU GCU GUU UUG-3′). .. For the DAT/iCre knockin mice, Cas9 mRNA and single guide RNA (sgRNA) were injected together with the targeting vector into the cytoplasm of two-cell stage embryos of C57BL/6NJcl mice using a modified 2C-HR-CRISPR method.57 The targeting vector was linearized using restriction enzymes, and then the 3′ end of the targeting vector was biotinylated with biotin-16-ddUTP (Roche, Basel, Switzerland) using terminal transferase (NEB Japan, Tokyo, Japan). .. The resulting DNA fragment was purified from the agarose gel, and its biotinylation efficiency was assessed by a depletion experiment using streptavidin magnetic beads (NEB Japan) and found to be close to 100%.

    Injection:

    Article Title: Assessing leaky expression of Cre-dependent DNA constructs in the mouse genome using sensitive bioluminescent reporters.
    Article Snippet: Both crRNA and tracrRNA were purchased from FASMAC, Atsugi, Japan and their sequences of the crRNAs were as follows: R26-T2-crRNA (5′-CGC CCA UCU UCU AGA AAG ACG UUU UAG AGC UAU GCU GUU UUG-3′) and PITCh-gRNA3-crRNA (5′-GCA UCG UAC GCG UAC GUG UUG UUU UAG AGC UAU GCU GUU UUG-3′). .. For the DAT/iCre knockin mice, Cas9 mRNA and single guide RNA (sgRNA) were injected together with the targeting vector into the cytoplasm of two-cell stage embryos of C57BL/6NJcl mice using a modified 2C-HR-CRISPR method.57 The targeting vector was linearized using restriction enzymes, and then the 3′ end of the targeting vector was biotinylated with biotin-16-ddUTP (Roche, Basel, Switzerland) using terminal transferase (NEB Japan, Tokyo, Japan). .. The resulting DNA fragment was purified from the agarose gel, and its biotinylation efficiency was assessed by a depletion experiment using streptavidin magnetic beads (NEB Japan) and found to be close to 100%.

    Modification:

    Article Title: Assessing leaky expression of Cre-dependent DNA constructs in the mouse genome using sensitive bioluminescent reporters.
    Article Snippet: Both crRNA and tracrRNA were purchased from FASMAC, Atsugi, Japan and their sequences of the crRNAs were as follows: R26-T2-crRNA (5′-CGC CCA UCU UCU AGA AAG ACG UUU UAG AGC UAU GCU GUU UUG-3′) and PITCh-gRNA3-crRNA (5′-GCA UCG UAC GCG UAC GUG UUG UUU UAG AGC UAU GCU GUU UUG-3′). .. For the DAT/iCre knockin mice, Cas9 mRNA and single guide RNA (sgRNA) were injected together with the targeting vector into the cytoplasm of two-cell stage embryos of C57BL/6NJcl mice using a modified 2C-HR-CRISPR method.57 The targeting vector was linearized using restriction enzymes, and then the 3′ end of the targeting vector was biotinylated with biotin-16-ddUTP (Roche, Basel, Switzerland) using terminal transferase (NEB Japan, Tokyo, Japan). .. The resulting DNA fragment was purified from the agarose gel, and its biotinylation efficiency was assessed by a depletion experiment using streptavidin magnetic beads (NEB Japan) and found to be close to 100%.

    Lysis:

    Article Title: Direct-to-library methods, systems, and compositions
    Article Snippet: .. 2.0 μL of 10 mM dATP, 2.0 μL Terminal Transferase (20 u/μL, NEB, Ipswich, MA) and 6.0 μL Nuclease-free water was added to prepare the A-tailing reaction which was incubated at 37° C. for 40 min. 300.0 μL of Lysis/Binding Buffer (Thermo-Fisher Scientific, Waltham, MA) was added to the reaction. .. The entire volume was then added to 50.0 μL of Dynabeads oligo (dT)25 (SEQ ID NO: 13) (Thermo-Fisher Scientific, Waltham, MA), which had been washed once with Lysis/Binding Buffer (Thermo-Fisher Scientific, Waltham, MA).



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    Effects of PUR on apoptosis. (A) Representative images of <t>TUNEL</t> staining (×200) among groups. (B) Flow cytometric analyses of apoptosis levels among groups. (C) Quantitative analyses of TUNEL staining among groups. (D) Quantitative analyses of apoptosis levels by flow cytometry among groups. (E-G) The protein levels in each group. Bars represent the mean ± SD. * P < .05 vs the NC group, # P < .05 vs the TGF-β1 group, n = 3. NC, negative control; PUR, puerarin; TUNEL, terminal <t>deoxynucleotidyl</t> <t>transferase</t> <t>dUTP</t> nick end labeling; TGF-β1, transforming growth factor-β1.
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    Image Search Results


    Effects of PUR on apoptosis. (A) Representative images of TUNEL staining (×200) among groups. (B) Flow cytometric analyses of apoptosis levels among groups. (C) Quantitative analyses of TUNEL staining among groups. (D) Quantitative analyses of apoptosis levels by flow cytometry among groups. (E-G) The protein levels in each group. Bars represent the mean ± SD. * P < .05 vs the NC group, # P < .05 vs the TGF-β1 group, n = 3. NC, negative control; PUR, puerarin; TUNEL, terminal deoxynucleotidyl transferase dUTP nick end labeling; TGF-β1, transforming growth factor-β1.

    Journal: Sexual Medicine

    Article Title: Puerarin alleviates oxidative stress, mitochondrial dysfunction, and apoptosis in corpus cavernosum smooth muscle cells through AKT/Nrf2/HO-1 pathway activation

    doi: 10.1093/sexmed/qfag022

    Figure Lengend Snippet: Effects of PUR on apoptosis. (A) Representative images of TUNEL staining (×200) among groups. (B) Flow cytometric analyses of apoptosis levels among groups. (C) Quantitative analyses of TUNEL staining among groups. (D) Quantitative analyses of apoptosis levels by flow cytometry among groups. (E-G) The protein levels in each group. Bars represent the mean ± SD. * P < .05 vs the NC group, # P < .05 vs the TGF-β1 group, n = 3. NC, negative control; PUR, puerarin; TUNEL, terminal deoxynucleotidyl transferase dUTP nick end labeling; TGF-β1, transforming growth factor-β1.

    Article Snippet: For in vitro apoptosis detection, terminal deoxynucleotidyl transferase dUTP nick end labeling (TUNEL) labeling was applied to cells with a commercial kit (C1086, Beyotime).

    Techniques: TUNEL Assay, Staining, Flow Cytometry, Negative Control